Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold351
Parameters: 2 7 7 80 10 50 1000
Length:  325634

Tables:   1   2   3   

This is table  3  of  3  ( 261 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
302431--303482
470
2.2
470
92
1
1748
26
29
19
25
1.99
303087--303330
55
4.3
56
84
8
307
27
27
20
23
1.99
303196--303637
156
2.9
152
88
6
653
25
29
20
24
1.99
303348--303500
61
2.6
60
83
10
199
24
28
20
26
1.99
303507--303762
61
4.3
61
79
10
266
25
27
21
25
1.99
303532--303757
122
1.9
121
86
4
330
25
27
20
26
1.99
303894--303997
42
2.5
41
80
10
113
17
27
10
44
1.82
304428--304456
12
2.3
13
94
5
51
68
3
0
27
1.05
304466--304735
35
7.7
35
95
0
477
41
5
32
20
1.75
306114--306861
79
9.4
79
90
0
1120
27
25
14
33
1.94
310918--310957
22
1.9
22
90
10
66
32
15
0
52
1.43
312650--312725
23
3.2
23
87
10
109
50
2
18
28
1.61
313264--313290
13
2.1
13
100
0
54
29
14
14
40
1.86
313273--313330
19
3.0
19
85
9
82
32
15
15
36
1.89
317495--317606
2
57.5
2
71
11
72
42
4
4
48
1.43
317669--317751
31
2.6
31
81
7
87
57
7
8
26
1.54
318834--318861
2
14.0
2
100
0
56
50
0
0
50
1.00
321667--321707
16
2.6
16
84
0
55
85
0
7
7
0.75
323163--323187
13
1.9
13
100
0
50
36
16
16
32
1.90
323143--323209
33
2.0
33
88
0
98
34
11
13
40
1.81
323250--323274
13
1.9
13
100
0
50
32
16
16
36
1.90

Tables:   1   2   3

The End!