Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold354
Parameters: 2 7 7 80 10 50 1000
Length:  564417

Tables:   1   2   3   4   

This is table  4  of  4  ( 368 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
545790--545864
20
3.8
19
78
7
87
41
12
13
33
1.81
546419--547536
28
39.1
28
83
6
1175
23
18
30
28
1.97
546424--547536
57
19.5
56
84
6
1233
23
18
30
28
1.97
546425--547538
85
13.0
84
82
7
1199
23
18
30
28
1.97
548752--548805
23
2.3
24
84
9
67
1
3
14
79
0.95
548772--548815
13
3.5
13
84
6
63
0
0
18
81
0.68
548752--548818
11
5.8
11
80
15
73
1
2
17
77
0.97
562782--562856
20
3.8
19
78
7
87
41
12
13
33
1.81

Tables:   1   2   3   4

The End!