Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold464
Parameters: 2 7 7 80 10 50 1000
Length:  258458

Tables:   1   2   3   

This is table  3  of  3  ( 266 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
222672--222722
19
2.7
20
79
11
63
56
0
0
43
0.99
222671--222715
18
2.3
20
81
14
58
60
0
0
40
0.97
222699--222765
31
2.2
30
84
10
84
55
0
0
44
0.99
222756--222785
15
1.9
16
93
6
53
53
3
0
43
1.17
224587--224621
15
2.3
15
100
0
70
37
22
0
40
1.55
227503--227533
7
4.4
7
91
0
53
0
12
3
83
0.75
229505--229554
20
2.5
20
93
0
82
34
12
4
50
1.58
229527--229643
53
2.2
53
83
1
155
30
15
10
43
1.80
229527--229662
52
2.6
53
81
3
141
31
15
9
43
1.79
231895--231957
27
2.3
27
83
5
74
31
36
6
25
1.81
241599--241653
14
3.9
14
78
0
56
30
9
29
30
1.88
243272--243327
28
2.0
28
85
0
76
53
0
7
39
1.28
243401--243453
22
2.4
22
81
12
56
56
1
5
35
1.34
243455--243499
22
2.0
22
83
8
56
55
4
0
40
1.20
243785--243910
20
6.9
19
70
21
74
44
0
0
54
1.05
243817--243928
11
10.9
11
71
18
66
40
0
0
59
0.97
243801--243906
36
3.1
34
78
16
112
43
0
0
56
0.99
243814--243961
19
8.1
20
72
21
78
37
0
0
61
1.06
243886--243939
28
2.0
27
85
10
74
29
1
0
68
1.00
243811--243938
8
15.5
8
69
24
72
39
0
0
60
1.03
243879--243961
37
2.2
40
81
16
104
30
1
1
67
1.06
248553--248598
23
2.0
23
91
0
74
47
17
17
17
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
248819--248866
23
2.1
23
92
0
78
66
4
0
29
1.10
250745--250785
21
2.0
20
85
4
55
41
4
2
51
1.36
250883--250925
17
2.7
15
80
16
50
46
0
0
53
1.00
252273--252317
22
2.0
22
82
0
54
53
0
4
42
1.21

Tables:   1   2   3

The End!