Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold474
Parameters: 2 7 7 80 10 50 1000
Length:  406844

Tables:   1   2   3   

This is table  3  of  3  ( 257 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
382057--382111
20
2.8
20
83
10
60
52
1
1
43
1.22
383099--383154
23
2.5
22
80
5
60
60
0
1
37
1.07
383520--383571
22
2.4
21
87
3
68
61
0
3
34
1.14
384483--384517
3
11.7
3
87
0
52
60
5
0
34
1.21
384931--385386
166
2.7
164
81
7
526
41
7
17
33
1.78
385324--385453
67
1.9
67
85
0
179
38
10
15
36
1.81
388737--388931
79
2.5
79
81
2
212
29
17
29
24
1.97
388883--388959
28
2.8
28
85
0
91
22
19
35
23
1.96
388942--389119
52
3.4
51
78
9
155
32
11
26
29
1.91
389149--389223
27
2.7
27
85
6
98
22
20
32
25
1.98
389207--389328
51
2.4
51
88
5
174
33
11
22
32
1.90
391694--391719
13
2.0
13
100
0
52
38
15
15
30
1.88
391673--391739
33
2.0
33
88
0
98
43
16
14
25
1.86
391830--391908
21
3.8
20
81
8
95
34
15
13
36
1.87
392652--393486
59
14.3
59
91
3
1227
24
20
28
25
1.99
394463--394502
20
2.0
20
95
0
71
2
0
10
87
0.63
394461--394501
12
3.4
12
86
6
57
2
0
7
90
0.54

Tables:   1   2   3

The End!