Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold495
Parameters: 2 7 7 80 10 50 1000
Length:  586005

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 495 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
567185--567359
61
2.9
60
80
3
183
54
1
6
38
1.33
567989--568029
13
2.8
15
78
14
50
63
0
0
36
0.95
569256--569299
18
2.4
18
84
3
61
47
0
0
52
1.00
569256--569300
19
2.4
20
78
10
51
46
0
0
53
1.00
569296--569335
21
1.9
21
90
10
64
60
0
0
40
0.97
572438--572462
2
12.5
2
100
0
50
48
0
0
52
1.00
572984--573032
11
4.4
11
87
5
71
8
8
0
83
0.81
572977--573026
23
2.2
23
100
0
100
12
8
0
80
0.92
576462--576553
18
5.1
18
73
21
77
58
1
0
40
1.05
577706--577747
16
2.6
16
82
10
50
71
2
2
23
1.10
579573--579639
34
2.0
34
90
0
107
34
5
11
47
1.65
580800--580945
77
1.9
76
87
1
211
47
10
9
32
1.70
582490--582524
2
17.5
2
100
0
70
48
0
0
51
1.00
582927--583148
34
6.6
34
81
11
242
40
25
7
26
1.81
582931--583148
102
2.1
102
89
2
332
40
25
7
26
1.81

Tables:   1   2   3   4   5

The End!