Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold629
Parameters: 2 7 7 80 10 50 1000
Length:  578285

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 488 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
571480--571614
53
2.5
53
92
1
225
28
17
17
37
1.92
571604--571655
20
2.6
19
85
8
68
28
15
17
38
1.90
571694--571734
21
2.0
21
85
9
57
39
9
12
39
1.76
573067--573130
28
2.2
30
78
10
71
26
4
7
60
1.44
573429--573456
2
14.0
2
100
0
56
50
0
0
50
1.00
575186--575213
4
7.0
4
100
0
56
75
0
0
25
0.81
575161--575204
23
2.0
22
86
4
61
81
4
0
13
0.83
575378--575407
15
1.9
16
93
6
53
66
0
10
23
1.21

Tables:   1   2   3   4   5

The End!