Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold85
Parameters: 2 7 7 80 10 50 1000
Length:  1350895

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 625 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1312160--1312263
31
3.4
31
98
0
199
37
16
17
28
1.91
1313039--1313087
21
2.3
21
85
0
62
38
22
4
34
1.73
1319881--1319935
19
2.8
19
91
2
92
38
9
20
32
1.84
1319920--1319948
13
2.2
13
100
0
58
37
13
17
31
1.89
1322964--1323008
2
22.5
2
100
0
90
48
0
0
51
1.00
1326323--1326675
186
1.9
184
84
5
471
51
7
9
31
1.61
1331060--1331154
32
3.0
32
93
0
163
37
14
13
33
1.86
1331079--1331135
13
3.9
13
74
24
51
38
15
12
33
1.85
1331059--1331175
19
6.8
19
75
21
105
36
13
14
35
1.86
1334680--1334737
13
4.0
13
74
23
53
32
17
15
34
1.91
1334694--1334756
19
3.6
19
76
24
84
34
19
12
33
1.89
1334681--1334758
32
2.4
32
97
0
147
33
17
14
34
1.90
1335790--1335834
22
2.1
22
95
4
83
60
0
0
40
0.97
1336795--1336867
38
1.9
38
88
2
112
39
6
12
41
1.69
1336882--1336925
19
2.3
19
88
0
61
45
0
6
47
1.29
1337596--1337679
29
2.8
30
83
3
107
40
4
2
52
1.35
1337604--1337683
30
2.7
29
86
1
106
37
6
1
55
1.33
1337635--1337699
30
2.2
30
82
0
76
40
9
3
47
1.51
1339084--1339115
2
16.0
2
100
0
64
50
0
0
50
1.00
1339316--1339356
2
20.5
2
89
0
64
56
0
0
43
0.99
1342584--1342689
54
2.0
54
98
0
203
41
10
18
29
1.84
1345762--1345814
21
2.4
22
80
20
58
56
0
0
43
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1346003--1346035
2
16.5
2
93
0
57
48
0
3
48
1.17
1347680--1347736
23
2.5
23
97
2
107
17
10
8
63
1.51
1347680--1347743
23
3.0
21
86
8
58
20
10
9
59
1.58

Tables:   1   2   3   4   5   6

The End!