Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold86
Parameters: 2 7 7 80 10 50 1000
Length:  313076

Tables:   1   2   3   

This is table  3  of  3  ( 257 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
289144--289390
41
5.8
41
74
13
171
21
26
12
39
1.88
289974--290105
50
2.7
49
84
2
158
27
16
15
40
1.89
291864--292018
79
2.0
79
87
2
222
30
25
10
32
1.90
291975--292048
28
2.6
28
85
4
105
22
28
21
27
1.99
291899--292094
107
1.8
108
93
3
342
28
26
13
31
1.94
293151--293201
19
2.6
20
93
3
86
37
15
15
31
1.89
293906--293936
6
5.3
6
92
7
55
16
0
83
0
0.64
293906--293937
11
2.8
11
95
4
55
18
0
81
0
0.70
300507--300558
27
1.9
27
92
0
86
48
0
15
36
1.45
303295--303343
17
2.9
17
79
11
64
51
8
0
40
1.32
306997--307091
20
4.8
19
69
13
57
45
10
15
28
1.80
306998--307091
40
2.3
40
87
3
136
44
10
15
28
1.80
307172--307225
20
2.7
20
88
2
72
33
14
12
38
1.85
311408--311475
30
2.4
29
85
9
95
55
1
0
42
1.08
311440--311511
36
2.0
36
83
5
92
51
1
4
43
1.29
312789--312849
26
2.3
27
81
16
74
57
1
0
40
1.08
312892--312941
19
2.7
20
84
9
61
26
8
2
64
1.32

Tables:   1   2   3

The End!