Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold962
Parameters: 2 7 7 80 10 50 1000
Length:  160331

Tables:   1   2   

This is table  2  of  2  ( 141 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
135163--135215
19
2.7
20
91
2
81
28
15
20
35
1.93
135260--135312
13
4.5
13
71
26
55
33
13
16
35
1.88
135244--135312
33
2.1
33
89
5
104
31
13
18
36
1.89
136431--136475
16
2.8
16
86
0
63
11
17
24
46
1.81
136448--136510
16
3.9
16
76
12
58
12
14
31
41
1.83
136513--136555
15
2.8
16
85
7
61
11
13
23
51
1.74
136714--136772
18
3.2
18
86
13
77
45
1
0
52
1.10
137975--138006
16
2.0
16
93
0
55
34
0
15
50
1.45
137998--138034
19
1.9
19
88
0
56
56
0
0
43
0.99
141952--141996
3
15.0
3
100
0
90
66
0
0
33
0.92
142771--142963
106
1.8
106
96
1
361
37
3
4
54
1.37
142926--142982
24
2.6
21
84
15
87
43
3
0
52
1.18
142932--142985
24
2.3
24
93
3
92
42
3
0
53
1.18
142910--142968
31
1.9
30
83
10
75
42
1
0
55
1.09
142771--142982
105
2.0
105
92
1
354
37
3
4
54
1.36
143066--144088
92
11.3
90
80
6
973
41
8
15
34
1.77
147335--147361
12
2.2
12
100
0
54
55
14
0
29
1.40
147490--147652
50
3.3
49
92
1
272
42
14
26
15
1.86
147976--148062
27
3.3
26
73
18
74
47
21
25
5
1.73
149200--149325
53
2.5
51
82
12
143
29
26
13
30
1.94
149258--149550
78
3.7
79
91
3
450
27
25
15
32
1.95

Tables:   1   2

The End!