Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168182.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_42, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  251127

Tables:   1   2   

This is table  2  of  2  ( 162 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
189454--189517
22
2.9
21
78
15
67
78
0
1
20
0.84
189424--189509
22
4.0
21
70
22
56
74
0
2
23
0.93
189469--189527
27
2.2
26
85
11
75
77
0
5
16
0.93
195715--195757
21
2.0
22
82
13
54
2
18
9
69
1.26
200086--200110
13
1.9
13
100
0
50
80
0
8
12
0.92
200422--200475
22
2.6
21
82
8
65
1
12
9
75
1.11
206298--206350
27
2.0
27
81
7
63
28
1
3
66
1.20
206973--207007
2
17.5
2
100
0
70
48
0
0
51
1.00
207204--207235
2
16.0
2
100
0
64
50
0
0
50
1.00
207569--207627
21
2.8
21
77
12
66
59
1
0
38
1.08
208251--208282
3
10.7
3
100
0
64
34
31
0
34
1.58
208281--208308
3
9.3
3
100
0
56
64
0
0
35
0.94
209103--209155
24
2.2
23
80
9
61
75
1
3
18
1.05
211044--211113
28
2.5
29
79
11
83
54
1
0
44
1.09
211044--211125
27
3.0
27
78
7
76
51
1
0
47
1.08
214182--214364
92
2.0
92
96
0
339
34
13
27
24
1.93
217505--217549
16
2.5
20
73
26
55
33
8
4
53
1.52
221699--221724
5
5.2
5
100
0
52
61
0
0
38
0.96
221644--221794
81
1.9
81
91
0
248
41
12
11
34
1.79
230287--230443
52
3.0
52
81
3
174
26
24
8
40
1.83
231310--231434
52
2.4
52
87
0
178
28
24
8
37
1.86
231310--231466
52
3.0
52
82
5
167
26
24
8
40
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
236619--236654
5
7.2
5
96
0
63
61
2
0
36
1.11
246016--246134
16
7.2
16
75
11
107
15
2
33
47
1.59
246029--246133
33
3.2
31
82
9
120
17
2
34
45
1.63
246012--246133
65
1.9
65
84
6
167
16
2
35
45
1.61
247577--247635
15
3.9
15
74
17
50
44
1
0
54
1.10
247844--247888
22
2.0
23
91
4
74
28
26
22
22
1.99
247778--248211
109
4.0
109
87
1
591
37
18
21
23
1.95
248172--248252
22
3.7
22
75
15
87
27
18
25
28
1.98
248177--248260
43
2.0
43
95
0
150
28
16
26
28
1.97
248232--248428
87
2.3
87
88
1
288
39
19
21
20
1.93
248406--248603
22
9.0
22
76
11
138
30
20
22
26
1.98
248406--248584
65
2.8
65
83
5
193
30
19
22
26
1.98
248678--248780
23
4.6
23
72
7
86
32
19
22
26
1.97
248684--248807
65
1.9
67
83
6
164
32
18
20
29
1.96
248554--248977
199
2.1
200
87
3
611
35
19
20
25
1.95
248700--249068
176
2.1
175
82
4
429
36
19
20
23
1.95
248873--248983
23
5.0
23
79
6
129
32
21
21
24
1.98
248873--248984
43
2.5
44
81
4
136
32
21
21
25
1.98
249246--249328
41
2.0
41
88
4
123
31
14
18
36
1.90
250998--251030
15
2.1
16
88
5
50
6
0
3
90
0.52

Tables:   1   2

The End!