Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168304.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_53, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  157624

Tables:   1   2   3   

This is table  3  of  3  ( 293 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
138092--138120
15
1.9
15
100
0
58
55
3
0
41
1.17
138203--138246
15
3.0
15
76
3
54
47
0
2
50
1.13
138576--138632
23
2.5
24
72
16
57
47
1
3
47
1.29
139139--139178
17
2.3
18
86
4
55
50
0
5
45
1.23
139297--139345
12
4.2
11
80
19
55
57
0
2
40
1.10
139496--139534
20
1.9
21
89
5
62
53
5
0
41
1.23
139543--139583
11
3.6
12
83
9
50
41
0
0
58
0.98
139528--139593
22
2.9
22
76
14
64
48
0
1
50
1.10
139715--139778
31
2.1
31
82
8
78
46
3
3
46
1.34
140193--140239
15
3.0
15
79
17
51
46
0
0
53
1.00
141140--141235
20
5.5
19
70
25
68
52
1
2
44
1.19
141141--141200
16
3.6
16
77
18
59
53
1
0
45
1.10
141165--141212
16
2.9
16
87
6
60
47
0
0
52
1.00
141855--141935
28
2.8
29
75
19
80
46
1
1
50
1.17
142345--142429
43
1.9
45
83
9
113
45
3
2
48
1.32
142671--142722
20
2.8
18
80
11
61
51
1
0
46
1.12
143560--143659
18
5.8
16
69
18
51
47
2
5
46
1.36
143995--144069
27
2.8
27
72
22
68
57
1
1
40
1.16
143995--144052
10
4.8
12
78
15
50
58
0
1
39
1.08
145437--145485
23
2.1
24
85
11
66
48
2
0
48
1.12
145438--145577
51
2.7
48
76
16
129
48
2
0
48
1.18
145462--145496
14
2.6
13
86
8
52
57
2
0
40
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
145532--145616
18
4.9
17
72
16
59
47
0
3
49
1.18
145526--145601
29
2.5
29
78
6
80
48
0
3
47
1.20
145520--145616
50
1.9
51
83
10
128
47
0
4
48
1.21
145755--145806
26
1.9
28
84
7
72
48
3
1
46
1.31
146679--146720
12
3.2
13
76
10
50
35
0
2
61
1.09
146998--147046
20
2.4
21
80
10
57
46
2
2
48
1.25
147567--147626
31
2.0
31
87
9
88
43
3
6
46
1.46
147991--148063
9
7.8
9
74
19
60
52
1
1
45
1.18
148803--148845
21
2.0
21
86
8
61
41
0
0
58
0.98
148810--148845
18
2.1
17
89
5
54
41
0
0
58
0.98
148841--148891
23
2.2
23
82
6
59
52
1
1
43
1.23
149134--149191
29
2.0
29
83
10
73
48
0
1
50
1.11
149541--149586
24
2.0
22
83
8
56
43
0
0
56
0.99
150186--150244
15
3.6
17
77
13
61
44
1
5
49
1.34
150171--150244
31
2.3
34
79
9
84
44
1
5
48
1.34
150994--151037
15
2.8
16
80
19
56
38
4
0
56
1.20
150967--151039
23
3.3
22
78
16
62
41
2
0
56
1.14
151117--151148
17
1.9
16
93
6
55
50
0
0
50
1.00
151399--151462
23
2.7
23
88
7
85
53
1
0
45
1.10
151402--151465
20
2.9
23
77
11
71
53
1
0
45
1.10
151516--151550
19
1.9
18
88
11
54
45
5
0
48
1.26
151565--151608
15
2.9
15
77
16
54
31
4
4
59
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
152789--152829
17
2.4
18
84
12
59
56
0
0
43
0.99
152789--152835
14
3.2
14
85
11
51
57
0
0
42
0.98
154130--154188
25
2.4
25
82
2
75
45
0
0
54
0.99
154322--154369
17
2.8
17
84
6
62
50
0
4
45
1.21
154530--154570
21
1.9
21
85
5
55
46
4
0
48
1.23
156117--156165
22
2.1
24
85
7
66
44
2
2
51
1.24
156717--156780
23
2.7
23
85
7
76
53
3
0
43
1.16
156834--156868
19
1.9
18
88
11
54
45
5
0
48
1.26
156883--156932
15
3.3
15
78
13
57
30
4
4
62
1.32

Tables:   1   2   3

The End!