Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167876.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_144, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66290

Tables:   1   2   

This is table  2  of  2  ( 139 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55560--55593
16
2.1
16
94
0
59
47
0
0
52
1.00
55642--55694
14
4.1
14
77
15
53
47
0
0
52
1.00
56134--58617
175
14.1
176
72
11
1193
41
10
8
39
1.70
56134--57002
177
4.9
177
75
8
572
43
10
7
38
1.68
57359--58001
353
1.8
352
80
10
785
41
11
7
39
1.71
57587--58626
355
2.9
348
78
9
782
40
10
9
40
1.71
58730--59788
355
3.0
358
76
8
888
41
11
7
39
1.69
59096--59581
181
2.7
180
76
10
485
41
11
6
40
1.67
59744--59830
42
2.0
43
93
2
149
50
10
10
28
1.69
60010--60058
17
2.7
19
75
18
59
40
12
6
40
1.67
60836--60876
16
2.4
18
84
12
59
60
2
0
36
1.10
61172--61218
14
3.1
15
77
22
53
48
2
0
48
1.13
61799--61832
17
2.0
17
100
0
68
29
0
5
64
1.17
62245--62298
21
2.5
21
74
11
56
57
0
3
38
1.17
63977--64497
279
1.9
273
91
3
864
28
14
11
45
1.80
64639--64686
6
7.5
6
77
13
51
60
4
4
31
1.35
65377--65793
183
2.3
181
79
6
429
43
8
7
40
1.64
66043--66101
25
2.3
26
82
11
77
54
0
3
42
1.17
66064--66111
22
2.2
22
92
0
78
54
0
2
43
1.12

Tables:   1   2

The End!