Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold289
Parameters: 2 7 7 80 10 50 1000
Length:  602941

Tables:   1   2   3   

This is table  3  of  3  ( 266 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
575605--575649
22
2.0
22
95
0
81
44
11
8
35
1.71
580751--580793
6
7.2
6
83
0
50
65
13
2
18
1.38
580941--580995
4
14.0
4
76
17
53
72
0
3
23
1.00
580869--581174
150
2.0
151
99
0
605
65
6
9
18
1.43
581029--581062
16
2.2
16
90
10
54
79
0
5
14
0.91
581091--581145
4
14.0
4
76
17
53
72
0
3
23
1.00
584316--584388
32
2.3
31
85
2
92
45
4
5
45
1.45
585244--585293
21
2.3
21
89
3
73
52
6
2
40
1.38
585946--586018
32
2.3
31
85
2
92
45
4
5
45
1.45
586874--586923
21
2.3
21
89
3
73
52
6
2
40
1.38
591734--591874
40
3.5
40
93
0
237
28
24
19
27
1.99
597604--597674
21
3.0
24
67
22
58
30
49
5
14
1.66
597541--599664
144
14.8
144
83
1
1982
25
49
4
20
1.68
597754--597830
24
3.2
23
67
24
61
20
58
3
16
1.54
597757--597834
21
3.4
21
74
19
84
23
57
3
15
1.54
597775--597861
27
3.5
26
72
18
85
26
51
4
17
1.64
597544--599660
240
8.8
240
85
1
2090
25
49
4
20
1.68
597997--598074
21
3.4
21
67
24
59
24
53
3
17
1.60
598399--598485
27
3.4
27
69
18
87
26
50
3
19
1.63
598417--598490
24
3.1
24
69
21
73
27
51
4
17
1.63
598516--598634
21
5.0
24
67
20
70
26
51
5
15
1.67
598903--598986
21
3.7
21
69
17
69
23
57
3
15
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
599002--599082
21
3.6
21
69
18
63
27
56
1
14
1.46
598927--599061
27
5.5
26
65
20
74
26
51
2
19
1.61
597541--599684
96
22.3
96
82
2
1799
25
49
4
20
1.68
600677--600975
147
2.0
148
99
0
591
45
5
6
42
1.51

Tables:   1   2   3

The End!