Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold355
Parameters: 2 7 7 80 10 50 1000
Length:  482196

Tables:   1   2   3   

This is table  3  of  3  ( 253 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
433453--433766
168
1.9
167
87
3
461
35
21
6
36
1.78
433779--433834
16
3.5
16
90
0
85
25
33
1
39
1.66
435696--436042
162
2.1
162
94
0
613
26
20
17
36
1.94
438867--439287
210
2.0
211
98
1
810
31
22
23
23
1.99
457597--457639
22
2.0
22
86
9
61
60
2
2
34
1.22
458458--458503
23
2.0
23
100
0
92
26
4
30
39
1.75
459373--459410
15
2.6
15
87
4
51
71
15
0
13
1.16
459464--459490
2
13.5
2
100
0
54
51
0
0
48
1.00
459952--460460
162
3.1
162
98
0
964
26
21
17
34
1.95
464366--464409
15
2.9
15
89
3
61
38
6
0
54
1.27
467245--467617
162
2.3
162
91
1
595
28
20
17
34
1.95
475351--475390
7
5.6
7
90
3
62
42
0
15
42
1.46
481575--481602
6
4.7
6
100
0
56
0
14
0
85
0.59

Tables:   1   2   3

The End!