Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold261
Parameters: 2 7 7 80 10 50 1000
Length:  750797

Tables:   1   2   3   

This is table  3  of  3  ( 255 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
708131--708182
6
8.7
6
93
0
86
1
0
28
69
0.99
715965--716010
19
2.4
20
75
10
51
65
4
6
23
1.35
716513--716538
4
6.5
4
100
0
52
76
0
0
23
0.78
717060--717102
23
1.9
23
85
4
61
41
13
6
37
1.72
717047--717102
22
2.5
22
81
13
62
44
16
5
33
1.70
722174--722218
23
2.0
23
91
4
74
46
17
4
31
1.68
722200--722252
19
3.0
17
78
10
61
35
20
7
35
1.81
722171--722228
22
2.6
22
86
7
82
43
18
3
34
1.68
724756--724805
24
2.1
24
100
0
100
44
12
18
26
1.84
729236--729277
22
1.9
22
100
0
84
45
16
9
28
1.79
734247--734282
15
2.5
14
86
8
54
44
8
0
47
1.33
741272--741391
46
2.7
46
85
3
174
29
10
22
38
1.87
746699--746826
67
1.9
67
91
0
211
27
28
20
23
1.99
747635--747694
28
2.1
28
96
0
111
26
15
18
40
1.90
749052--749079
8
3.5
8
100
0
56
10
39
0
50
1.37

Tables:   1   2   3

The End!