Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold182
Parameters: 2 7 7 80 10 50 1000
Length:  891401

Tables:   1   2   3   4   

This is table  4  of  4  ( 404 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
821646--822270
75
8.2
73
80
10
618
35
20
16
28
1.94
821678--822270
149
3.9
148
83
8
676
34
20
16
28
1.95
823156--823210
11
5.6
10
85
12
53
1
5
7
85
0.80
823146--823211
20
3.5
19
74
14
55
4
6
6
83
0.91
823147--823208
9
6.8
9
80
15
56
3
6
6
83
0.88
835834--835962
18
7.4
18
75
12
92
45
11
13
28
1.79
835834--835880
16
2.8
16
87
6
58
46
12
14
25
1.80
835834--835972
71
2.0
70
85
8
192
43
11
12
32
1.79
835834--835962
17
7.4
17
75
11
100
45
11
13
28
1.79
836008--836127
44
2.8
42
83
13
138
49
10
11
29
1.72
836084--836157
18
4.2
18
75
5
71
50
6
14
28
1.69
836086--836159
35
2.1
34
87
2
103
50
8
13
28
1.70
836086--836162
17
4.5
16
77
19
84
49
7
14
28
1.71
835968--836316
181
1.9
181
100
0
698
47
8
12
31
1.71
836189--836308
44
2.8
42
83
13
138
49
10
11
29
1.72
836265--836316
17
3.0
17
81
10
61
50
7
13
28
1.69
836375--836486
31
3.8
30
76
20
130
37
7
11
43
1.68
836406--836489
25
3.0
27
72
24
93
39
7
13
40
1.71
836376--836489
56
2.0
57
98
1
221
38
7
12
42
1.70
836465--836513
17
2.8
17
82
11
64
44
10
16
28
1.80
836433--836631
111
1.8
110
97
1
380
40
8
13
38
1.75
836576--836624
17
2.9
16
77
22
55
42
12
16
28
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
837187--837234
19
2.5
19
79
0
51
8
20
43
27
1.80
837396--837464
6
11.2
6
76
15
61
0
21
0
78
0.76
837396--837455
11
5.4
11
73
11
50
0
20
0
80
0.72
837396--837458
13
5.1
13
76
14
62
0
20
0
79
0.73
837390--837464
19
4.1
19
76
10
75
1
20
0
78
0.82
837400--837464
32
2.1
30
86
13
87
0
23
0
76
0.78
837396--837467
25
3.0
24
78
11
76
0
23
0
76
0.79
837545--837590
22
2.1
22
87
0
65
0
28
0
71
0.86
837558--837591
12
2.6
13
90
9
52
0
23
0
76
0.79
837764--837809
24
1.9
24
82
8
58
8
23
2
65
1.32
837954--838093
59
2.4
58
83
8
176
37
5
23
33
1.79
837954--838093
29
4.8
28
80
7
129
37
5
23
33
1.79
841055--841764
89
8.0
89
85
1
876
23
24
26
26
2.00
841076--841665
44
13.3
45
62
9
154
22
25
25
26
2.00
843082--843140
16
3.4
17
73
13
57
25
0
3
71
1.02
855228--855475
120
2.1
121
98
1
482
47
7
2
42
1.45
861007--861051
20
2.3
20
80
3
56
33
2
17
46
1.61
876413--876454
22
2.0
21
85
4
57
54
0
2
42
1.13
876549--876595
10
4.5
11
77
17
55
61
0
2
36
1.08
877588--877643
21
2.8
20
74
12
53
37
0
1
60
1.07
887131--887183
18
2.8
19
83
11
56
66
0
3
30
1.10
887172--887215
19
2.3
20
80
11
56
63
4
0
31
1.14

Tables:   1   2   3   4

The End!