Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold209
Parameters: 2 7 7 80 10 50 1000
Length:  944012

Tables:   1   2   3   4   

This is table  4  of  4  ( 373 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
918548--918577
15
2.0
15
93
0
51
36
3
0
60
1.14
926443--926474
16
2.0
16
93
0
55
43
40
6
9
1.62
927025--927058
3
11.0
3
93
6
59
64
0
2
32
1.08
928537--928902
122
2.9
126
84
6
429
30
24
18
27
1.98
928648--928907
132
2.0
132
86
3
371
29
24
18
28
1.98
928730--928907
44
4.0
44
66
11
121
28
25
17
28
1.98
928929--929389
100
4.6
100
92
1
737
25
24
20
29
1.99
928935--929389
50
9.1
50
70
5
312
25
23
20
29
1.99
930651--930682
7
4.6
7
100
0
64
0
12
0
87
0.54
936327--936387
3
19.7
3
86
6
86
63
1
4
29
1.24
936936--936998
32
2.0
32
96
0
117
26
31
30
11
1.91
942987--943092
39
2.6
40
74
14
115
34
5
28
31
1.80
943874--943907
12
2.8
12
86
0
50
17
70
2
8
1.25

Tables:   1   2   3   4

The End!