Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: scaffold304 Parameters: 2 7 7 80 10 50 1000 Length: 1004668

Tables:   1   2   3   4   

This is table  4  of  4  ( 382 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
961805--961848
22
2.0
23
90
4
72
70
15
9
4
1.30
962639--962671
15
2.2
15
100
0
66
33
6
0
60
1.21
962639--962687
3
16.3
3
78
0
53
32
4
4
59
1.35
964635--964675
22
1.9
21
95
5
73
24
14
19
41
1.89
967452--967516
31
2.1
32
82
2
78
73
6
16
3
1.16
968592--968630
16
2.5
16
83
4
53
28
2
2
66
1.18
969819--969923
37
2.8
37
89
2
158
17
15
31
36
1.91
970882--970939
25
2.3
25
90
0
89
22
27
32
17
1.96
971674--971730
25
2.3
25
78
0
60
26
15
19
38
1.92
971783--971903
41
3.0
40
77
8
138
46
1
18
33
1.59
971783--971887
13
7.9
14
70
16
55
47
0
17
34
1.54
972714--972759
22
2.1
22
100
0
92
30
4
36
28
1.76
973483--973524
22
1.9
22
90
0
66
7
45
7
40
1.59
976695--976740
9
5.1
9
91
0
74
34
10
41
13
1.79
978945--978996
26
2.0
26
100
0
104
26
26
7
38
1.83
980702--980778
27
2.9
27
73
9
77
32
15
2
49
1.58
989046--989109
30
2.1
30
100
0
128
43
12
4
39
1.63
989300--989437
2
69.0
2
100
0
276
50
0
0
50
1.00
989628--989691
30
2.1
30
100
0
128
39
4
12
43
1.63
997384--997424
1
41.0
1
95
0
64
95
0
0
4
0.28
997378--997424
16
3.1
16
90
6
71
89
0
2
8
0.57
1004512--1004570
21
2.8
21
84
0
82
28
3
33
33
1.74

Tables:   1   2   3   4   

The End!