Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397286.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_459.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  854433

Tables:   1   2   3   

This is table  3  of  3  ( 244 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
852091--854158
171
12.1
170
77
5
1774
35
14
12
38
1.83
852091--854170
854
2.4
851
79
5
2113
35
14
12
37
1.83
852146--854164
683
3.0
674
78
7
2008
35
14
12
38
1.83
854138--854207
35
2.0
35
94
0
122
47
10
15
27
1.77

Tables:   1   2   3

The End!