Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005788.1 Hibiscus syriacus cultivar Beakdansim tig00013565_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  403709

Tables:   1   2   3   

This is table  3  of  3  ( 262 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
378712--378859
36
4.1
35
85
7
181
41
10
17
30
1.84
380173--380435
95
2.7
95
86
4
332
31
17
16
33
1.93
382064--382124
16
3.9
16
93
2
97
27
22
6
42
1.78
384572--384602
15
2.1
15
100
0
62
74
6
12
6
1.21
385827--385888
2
31.0
2
100
0
124
50
0
0
50
1.00
387224--387261
6
6.2
6
87
6
58
0
5
78
15
0.91
390981--391007
3
9.0
3
100
0
54
66
0
0
33
0.92
392447--392513
21
3.4
21
64
19
63
43
14
13
28
1.84
392399--392510
37
3.0
37
93
0
188
42
13
14
29
1.83
392801--392870
23
3.0
22
83
6
68
38
1
2
57
1.23
392834--392874
2
20.5
2
100
0
82
48
0
0
51
1.00
392917--392994
9
8.1
9
74
14
59
24
2
1
71
1.06
393107--393150
15
2.9
15
80
12
54
20
4
0
75
0.98
396310--396362
27
2.0
26
88
3
79
73
3
18
3
1.14
396312--396362
13
3.8
14
80
12
54
72
3
19
3
1.16
397490--397592
32
3.2
32
81
2
118
30
11
21
36
1.89
398790--398886
36
2.7
36
83
4
124
24
16
14
44
1.85
398891--398950
30
2.0
30
86
3
84
43
15
10
31
1.79
399087--399242
84
1.8
85
82
6
201
36
21
18
23
1.95
399704--399809
37
2.9
36
85
2
140
41
14
13
31
1.84
400067--400111
23
2.0
23
82
8
56
17
11
4
66
1.38
403545--403613
23
3.1
23
81
6
72
56
18
11
13
1.66

Tables:   1   2   3

The End!