Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006743.1 Hibiscus syriacus cultivar Beakdansim tig00016935_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  431342

Tables:   1   2   3   

This is table  3  of  3  ( 251 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
420777--420820
19
2.2
20
84
4
54
56
0
0
43
0.99
420837--420869
17
1.9
17
93
0
57
48
0
0
51
1.00
421191--421219
13
2.1
14
93
6
51
51
0
0
48
1.00
420796--421562
355
2.2
352
85
7
1022
44
8
8
37
1.66
421468--421566
26
3.9
26
71
16
91
52
0
3
44
1.16
421459--421561
34
2.9
34
79
12
102
52
0
2
44
1.16
421472--421560
25
3.5
26
72
18
89
50
0
3
46
1.18
421584--421628
23
2.0
21
91
8
72
44
4
0
51
1.21
428230--428280
26
2.0
26
84
0
66
49
21
1
27
1.60
429566--429619
26
2.1
26
82
3
65
48
20
3
27
1.66
429738--429802
25
2.6
26
81
13
75
44
1
1
52
1.19

Tables:   1   2   3

The End!