Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007739.1 Hibiscus syriacus cultivar Beakdansim tig00109999_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  642700

Tables:   1   2   3   4   

This is table  4  of  4  ( 373 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
603125--603455
158
2.1
157
80
7
373
33
18
25
22
1.97
603105--603504
53
7.5
54
80
8
356
32
19
25
24
1.98
603817--603843
2
13.5
2
100
0
54
51
0
0
48
1.00
611087--611510
58
7.8
53
73
10
270
30
8
17
42
1.80
611088--611451
160
2.2
157
79
8
365
29
9
17
43
1.80
611516--611639
42
3.0
41
75
9
108
24
22
19
33
1.97
611501--612122
240
2.6
239
90
3
930
29
19
17
33
1.95
622089--622138
20
2.5
20
86
0
73
38
18
14
30
1.89
622110--622148
20
2.0
20
84
0
51
35
17
20
25
1.95
638358--638385
8
3.5
8
100
0
56
39
0
10
50
1.37
641859--641902
11
4.1
10
82
11
52
86
0
4
9
0.70
641865--641894
12
2.5
12
100
0
60
93
0
0
6
0.35
641859--641902
22
2.0
22
90
0
70
86
0
4
9
0.70

Tables:   1   2   3   4

The End!