Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007817.1 Hibiscus syriacus cultivar Beakdansim tig00110152_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  465523

Tables:   1   2   3   

This is table  3  of  3  ( 255 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
417736--417814
23
3.4
23
82
0
104
21
20
25
32
1.97
417772--417861
24
3.8
24
75
10
80
21
22
25
31
1.98
424663--424733
23
3.1
23
85
4
99
22
15
25
36
1.93
424721--424778
24
2.4
23
80
2
71
27
17
22
32
1.96
425771--425796
9
2.9
9
100
0
52
23
0
7
69
1.14
426710--427029
132
2.4
131
90
1
480
30
10
18
40
1.84
427148--427215
35
1.9
35
93
0
118
27
8
23
39
1.84
431071--431122
12
4.2
12
76
16
52
15
3
7
73
1.21
435915--435962
14
3.4
14
94
2
78
72
0
6
20
1.05
437999--438046
21
2.5
19
87
12
64
27
14
27
31
1.95
441151--441189
20
2.0
20
89
0
60
33
10
23
33
1.88
442576--442615
22
1.9
22
85
10
57
30
35
2
32
1.71
445287--445326
16
2.5
15
88
11
62
77
2
12
7
1.07
461444--461497
26
2.1
26
100
0
108
12
22
12
51
1.74
463428--463467
21
2.0
20
90
5
62
72
2
0
25
0.97

Tables:   1   2   3

The End!