Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007846.1 Hibiscus syriacus cultivar Beakdansim tig00110202_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  846497

Tables:   1   2   3   4   

This is table  4  of  4  ( 396 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
756274--756378
32
3.5
30
75
16
101
40
17
17
25
1.90
758246--758276
15
2.1
15
93
0
53
41
25
12
19
1.87
763432--763521
45
2.0
45
97
0
171
22
22
16
38
1.93
767210--767513
151
2.0
151
98
0
581
25
17
25
30
1.97
767916--767949
17
2.0
17
94
0
59
32
23
23
20
1.98
768349--768396
24
2.0
25
95
4
89
31
35
16
16
1.92
776771--776812
20
2.1
20
86
0
57
30
21
14
33
1.93
785727--785768
20
2.1
20
86
0
57
30
21
14
33
1.93
788595--788819
109
2.1
109
97
0
425
30
13
17
38
1.89
789578--789635
20
2.9
20
70
14
57
41
15
8
34
1.78
790112--790148
19
1.9
19
94
0
65
32
18
18
29
1.96
791190--791373
36
5.1
36
93
0
296
33
22
25
19
1.97
791436--791472
19
1.9
19
94
0
65
32
18
18
29
1.96
793625--793668
16
2.8
16
79
10
54
40
0
0
59
0.98
795280--795319
2
20.0
2
100
0
80
50
0
0
50
1.00
800142--800192
17
3.0
17
77
5
59
39
0
0
60
0.97
800306--800362
25
2.2
25
87
9
78
42
3
5
49
1.42
802559--802614
20
2.7
21
83
2
60
33
23
19
23
1.97
802614--802695
44
1.9
41
85
7
110
31
4
29
34
1.79
802616--802706
19
4.4
20
74
17
96
35
4
28
31
1.77
803002--803058
6
9.7
6
98
1
107
0
17
50
31
1.46
809547--809587
21
2.0
21
100
0
82
43
12
19
24
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
814184--814224
21
2.0
21
100
0
82
43
12
19
24
1.85
818921--818963
20
2.2
20
100
0
86
37
23
4
34
1.76
821801--821843
21
2.0
21
86
0
59
30
27
25
16
1.97
821801--821972
66
2.6
66
84
7
197
27
26
27
18
1.98
822276--822347
29
2.5
29
90
0
108
37
11
12
38
1.79
822362--822420
30
1.9
31
86
3
84
37
6
22
33
1.80
822639--822705
22
3.0
22
100
0
134
19
26
26
26
1.99
828720--828762
21
2.0
21
86
0
59
30
27
25
16
1.97
828742--828891
67
2.3
66
88
3
212
26
27
27
18
1.98
829196--829267
29
2.5
29
90
0
108
37
11
12
38
1.79
829282--829340
30
1.9
31
86
3
84
37
6
22
33
1.80
829560--829626
22
3.0
22
100
0
134
19
26
26
26
1.99
833334--833387
23
2.4
22
82
14
65
20
29
20
29
1.98
843851--843910
31
2.0
30
83
3
75
36
20
3
40
1.69

Tables:   1   2   3   4

The End!