Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007927.1 Hibiscus syriacus cultivar Beakdansim tig00110333_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  706544

Tables:   1   2   3   4   

This is table  4  of  4  ( 369 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
692009--692149
50
2.8
50
100
0
282
39
21
14
24
1.91
692059--692299
133
1.8
133
99
0
473
37
21
14
27
1.92
693042--693084
18
2.5
17
81
7
52
51
6
9
32
1.61
693411--693491
7
12.1
7
89
9
109
0
9
0
90
0.47
693413--693493
1
81.0
1
82
0
99
0
8
0
91
0.42
693411--693483
13
5.6
13
91
4
112
0
8
0
91
0.41
693411--693496
20
4.2
20
88
7
120
0
10
0
89
0.48
704811--704849
20
2.0
20
90
5
62
58
5
0
35
1.20
706137--706259
3
41.7
3
84
6
162
65
0
2
32
1.06

Tables:   1   2   3   4

The End!