Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007929.1 Hibiscus syriacus cultivar Beakdansim tig00110336_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  398994

Tables:   1   2   3   

This is table  3  of  3  ( 263 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
373631--373663
15
2.2
15
94
0
57
36
30
18
15
1.91
373775--373843
24
2.8
26
83
12
85
31
24
5
37
1.79
373808--373843
12
3.0
12
91
0
63
36
25
5
33
1.79
374151--374376
64
3.5
64
81
3
206
28
19
19
33
1.96
380550--380582
15
2.2
15
94
0
57
36
30
18
15
1.91
380694--380762
24
2.8
26
83
12
85
31
24
5
37
1.79
380727--380762
12
3.0
12
91
0
63
36
25
5
33
1.79
381134--381276
64
2.2
63
80
7
164
27
20
18
33
1.96
382773--382831
31
1.9
31
89
6
93
72
3
18
5
1.17
382761--382841
5
13.7
6
73
18
55
77
2
16
3
1.01
382759--382841
11
7.6
11
72
20
68
77
2
16
3
1.02
385713--386823
123
8.8
123
78
9
1070
38
15
18
26
1.91
386256--386294
17
2.3
17
95
0
69
46
2
17
33
1.62
386132--386417
140
2.0
140
89
2
441
39
13
19
26
1.89
386009--386797
263
3.0
260
82
9
926
39
15
19
26
1.90
386644--386677
14
2.4
14
95
0
59
50
5
17
26
1.69
386642--386679
14
2.4
16
79
20
53
52
5
18
23
1.65
388153--388229
14
5.6
14
79
11
61
27
7
2
62
1.36
388138--388243
26
3.9
27
75
18
78
25
8
1
64
1.32
388196--388257
26
2.3
26
81
13
65
20
9
0
69
1.16
391480--391591
35
3.2
34
82
7
134
44
18
4
32
1.70
396068--396186
35
3.3
36
84
5
161
42
17
5
33
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
396070--396217
72
2.1
68
83
9
192
41
18
6
33
1.76

Tables:   1   2   3

The End!