Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008002.1 Hibiscus syriacus cultivar Beakdansim tig00110461_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1031338

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 489 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
995486--995533
3
15.7
3
87
12
55
29
0
0
70
0.87
995590--995654
33
2.0
33
93
0
112
43
20
10
26
1.84
996035--996067
2
16.5
2
100
0
66
48
0
0
51
1.00
996046--996114
33
2.0
37
83
11
92
36
1
0
62
1.04
999778--999804
3
9.0
3
100
0
54
33
0
0
66
0.92
1007963--1007999
15
2.5
15
95
0
65
35
13
21
29
1.92
1014937--1015002
33
2.0
34
82
8
82
31
13
10
43
1.78
1022588--1022686
49
2.0
49
100
0
198
47
6
24
22
1.73
1023862--1023892
6
5.0
6
96
4
53
35
0
0
64
0.94

Tables:   1   2   3   4   5

The End!