Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008005.1 Hibiscus syriacus cultivar Beakdansim tig00110467_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1778185

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 727 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1766900--1767058
77
2.1
77
90
2
248
36
21
14
27
1.92
1766974--1767103
57
2.3
57
85
5
165
37
20
13
28
1.90
1767051--1767138
37
2.4
37
84
3
106
34
21
17
27
1.95
1767125--1767193
20
3.4
20
88
4
111
33
24
15
26
1.95
1767229--1767311
20
4.3
19
69
15
71
24
12
26
37
1.90
1768409--1768469
24
2.5
24
84
10
79
39
9
1
49
1.46
1774892--1774941
22
2.3
22
100
0
100
44
8
22
26
1.80

Tables:   1   2   3   4   5   6   7

The End!