Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008018.1 Hibiscus syriacus cultivar Beakdansim tig00110485_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  927418

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 495 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
884200--884415
31
7.0
31
96
1
389
19
18
22
38
1.93
888047--888113
16
4.2
16
74
0
62
53
10
13
22
1.69
888047--888113
32
2.1
32
85
0
89
53
10
13
22
1.69
890390--890439
24
2.1
24
85
7
66
60
16
2
22
1.46
897121--897164
21
2.1
21
86
0
61
22
18
29
29
1.97
899449--899498
24
2.1
24
85
7
66
60
16
2
22
1.46
902303--902344
19
2.2
19
91
0
66
14
30
30
23
1.94
902326--902387
23
2.8
22
82
2
79
22
20
30
25
1.98
906196--906235
21
1.9
21
85
10
55
35
7
2
55
1.42
917665--917817
77
2.0
77
87
5
220
43
5
11
38
1.66
918437--918503
16
4.2
16
74
0
62
53
10
13
22
1.69
918437--918503
32
2.1
32
85
0
89
53
10
13
22
1.69
918463--918534
32
2.2
32
87
0
99
54
11
13
20
1.70
918441--918539
16
6.2
17
72
9
57
52
14
14
19
1.74
924807--924881
35
2.2
35
95
2
134
40
16
10
33
1.82

Tables:   1   2   3   4   5

The End!