Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008161.1 Hibiscus syriacus cultivar Beakdansim tig00110730_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  673301

Tables:   1   2   3   4   

This is table  4  of  4  ( 371 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
654639--654715
34
2.2
34
84
11
95
20
1
16
61
1.42
656403--656523
51
2.4
51
81
0
143
47
13
13
25
1.78
656609--656687
38
2.1
39
83
7
99
55
0
5
39
1.22
656911--656997
38
2.3
38
77
15
90
47
1
3
48
1.26
657044--657111
30
2.4
27
74
21
68
41
5
0
52
1.25
660640--660723
38
2.2
38
100
0
168
39
23
2
34
1.68
661680--661716
19
1.9
19
89
10
58
48
8
0
43
1.32
666735--666854
35
3.3
35
69
21
100
20
18
19
41
1.90
666708--666924
76
2.8
77
83
2
258
23
19
17
39
1.92
667692--667741
21
2.3
23
79
6
59
58
16
18
8
1.62
672106--672152
25
1.9
25
82
4
60
59
6
6
27
1.46

Tables:   1   2   3   4

The End!