Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008251.1 Hibiscus syriacus cultivar Beakdansim tig00110903_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  521115

Tables:   1   2   3   

This is table  3  of  3  ( 253 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
476070--476184
42
2.8
41
78
6
124
33
22
19
24
1.97
478312--478368
17
3.6
16
81
11
57
0
17
0
82
0.67
478319--478370
26
2.0
26
92
7
88
0
19
0
80
0.71
478312--478370
7
8.7
7
72
20
54
0
18
0
81
0.69
478324--478378
26
2.1
26
90
6
85
1
18
0
80
0.81
484068--484096
9
3.3
9
95
4
51
82
6
0
10
0.83
489297--489323
13
2.1
13
100
0
54
33
0
14
51
1.43
492879--494128
312
4.0
313
98
0
2418
25
20
17
36
1.94
497711--497764
19
2.9
19
72
22
60
57
0
1
40
1.09
502945--503002
25
2.3
26
90
3
91
60
3
29
6
1.39
505916--505964
25
2.0
24
92
4
80
61
0
30
8
1.25
513820--513857
17
2.1
19
85
9
53
28
18
0
52
1.45
516137--516203
22
3.0
22
97
0
125
25
17
14
41
1.88

Tables:   1   2   3

The End!