Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008293.1 Hibiscus syriacus cultivar Beakdansim tig00110957_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  338481

Tables:   1   2   3   

This is table  3  of  3  ( 248 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
314200--314282
42
2.0
42
92
0
139
21
34
8
34
1.84
314191--314282
12
7.9
12
78
7
64
21
34
7
35
1.82
314218--314283
21
3.3
18
68
22
51
19
34
9
36
1.84
315731--317288
200
7.8
200
98
1
2960
31
15
15
37
1.89
317411--317459
19
2.6
19
93
0
80
57
10
2
30
1.43
319236--319299
32
2.0
32
87
0
92
25
43
1
29
1.64
321874--322320
228
2.0
226
92
2
754
39
7
7
45
1.61
335911--335972
31
2.0
31
100
0
124
51
9
9
29
1.66

Tables:   1   2   3

The End!