Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008324.1 Hibiscus syriacus cultivar Beakdansim tig00111028_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  430640

Tables:   1   2   3   

This is table  3  of  3  ( 253 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
407500--407562
26
2.4
27
76
12
69
76
6
4
12
1.14
407625--407659
18
2.0
18
88
5
54
71
0
14
14
1.15
407778--407812
5
6.8
5
90
6
52
77
0
2
20
0.90
407786--407843
16
3.6
16
73
11
55
74
1
0
24
0.92
407840--407907
19
3.6
18
75
9
64
67
1
5
25
1.21
407948--407993
16
3.0
16
87
9
69
63
0
2
34
1.07
407946--407999
20
2.8
20
83
10
60
64
0
1
33
1.04
407952--407996
14
3.1
14
87
6
63
64
0
2
33
1.06
414596--414638
22
2.0
21
86
8
61
16
4
30
48
1.66
418204--418629
217
2.0
218
90
1
685
36
13
14
36
1.84
419039--419380
42
8.1
42
90
0
443
34
25
26
14
1.94
422503--422532
14
2.1
14
100
0
60
0
36
0
63
0.95
427232--427308
34
2.3
32
78
8
84
38
7
3
49
1.50

Tables:   1   2   3

The End!