Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008341.1 Hibiscus syriacus cultivar Beakdansim tig00111067_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1248125

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 617 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1199825--1199851
12
2.2
12
100
0
54
25
18
48
7
1.74
1207013--1207051
19
2.1
18
85
4
51
23
10
0
66
1.22
1207042--1207103
26
2.4
26
100
0
124
19
8
6
66
1.40
1208629--1208765
8
17.4
8
71
22
60
78
0
16
4
0.90
1208641--1208767
15
8.6
14
73
17
89
80
0
14
4
0.87
1208679--1208767
7
11.9
7
77
17
90
80
0
16
2
0.80
1208633--1208767
51
2.6
50
79
10
139
80
0
15
4
0.87
1208634--1208766
44
3.1
41
78
16
144
79
0
15
4
0.88
1208630--1208767
65
2.1
65
81
11
158
79
0
15
4
0.88
1210703--1210788
37
2.4
36
75
7
84
27
13
15
43
1.85
1210743--1210826
36
2.3
36
79
4
89
29
16
15
38
1.90
1211774--1212007
115
2.0
116
80
5
260
34
19
15
30
1.93
1212379--1212410
15
2.1
15
94
0
55
18
40
15
25
1.90
1223241--1223288
23
2.0
24
84
4
62
33
16
25
25
1.96
1229782--1230762
327
3.0
327
97
0
1854
28
12
24
34
1.92
1231873--1231945
34
2.1
34
89
0
110
26
20
9
43
1.82
1234118--1234158
2
21.0
2
90
5
66
46
0
0
53
1.00

Tables:   1   2   3   4   5   6

The End!