Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008655.1 Hibiscus syriacus cultivar Beakdansim tig00111649_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  378222

Tables:   1   2   3   

This is table  3  of  3  ( 266 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
318890--318946
22
2.5
24
82
5
73
14
15
19
50
1.77
319311--319365
3
19.0
3
75
20
55
34
0
0
65
0.93
319311--319362
19
2.7
19
83
13
63
34
0
0
65
0.93
327955--327993
18
2.1
19
85
4
53
43
17
15
23
1.87
328917--329568
257
2.5
255
87
2
919
33
15
16
34
1.90
329661--329763
42
2.5
41
73
12
102
24
23
20
32
1.98
329222--329957
372
2.0
371
86
2
1023
32
17
16
33
1.93
330107--330148
12
3.3
13
81
15
52
40
0
0
59
0.97
330117--330149
14
2.3
15
89
5
50
39
0
0
60
0.97
336960--337018
3
19.7
3
96
0
109
33
1
0
64
1.04
337014--337054
15
2.9
14
89
7
64
60
0
0
39
0.96
337014--337054
14
2.9
15
92
7
68
60
0
0
39
0.96
342550--342582
15
2.3
15
89
5
50
48
0
3
48
1.17
350168--350212
16
2.8
16
83
10
56
28
8
6
55
1.56
350994--351793
83
9.7
83
96
0
1378
25
13
23
37
1.91
352536--352814
117
2.4
117
91
3
442
36
13
19
30
1.90
352885--353270
117
3.3
116
87
4
519
37
12
19
30
1.89
353493--353542
3
16.7
3
91
0
82
32
2
0
66
1.03
353538--353578
12
3.4
13
87
12
61
60
0
0
39
0.96
356323--356382
21
2.7
23
70
17
63
38
31
11
18
1.87
356324--356382
23
2.7
23
75
15
61
38
32
11
16
1.86
357057--357106
19
2.6
19
93
0
82
22
26
30
22
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
362243--362290
23
2.1
23
100
0
96
25
41
4
29
1.74
365875--365909
15
2.2
16
90
5
54
40
8
5
45
1.58
373089--373133
13
3.4
13
77
17
56
40
0
0
60
0.97
373081--373159
27
3.0
27
87
7
110
37
2
0
59
1.11

Tables:   1   2   3

The End!