Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008691.1 Hibiscus syriacus cultivar Beakdansim tig00111719_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  175273

Tables:   1   2   

This is table  2  of  2  ( 134 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
144367--144452
6
14.3
6
77
0
64
37
8
34
19
1.82
144382--144456
3
25.0
3
73
0
60
36
6
34
22
1.81
144370--144448
36
2.2
36
90
0
122
35
8
35
20
1.84
144370--144452
12
6.9
12
83
0
94
36
8
34
20
1.83
145928--147101
183
6.4
183
95
0
2091
36
14
16
32
1.89
145928--147101
547
2.1
549
97
0
2217
36
14
16
32
1.89
149582--149635
23
2.3
23
93
0
90
37
5
16
40
1.72
150066--150102
18
2.1
18
89
0
56
32
5
10
51
1.60
150058--150104
24
2.0
24
86
0
67
34
4
14
46
1.64
150359--150445
39
2.2
39
91
0
147
48
19
13
18
1.81
150863--150926
23
2.8
23
90
0
101
35
4
21
37
1.75
150863--150935
23
3.2
24
86
7
98
34
4
20
41
1.72
151297--151369
23
3.2
23
88
0
101
34
4
21
39
1.73
150652--151707
434
2.4
432
97
1
1985
41
7
12
39
1.71

Tables:   1   2

The End!