Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008722.1 Hibiscus syriacus cultivar Beakdansim tig00111780_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  447499

Tables:   1   2   3   

This is table  3  of  3  ( 254 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
405839--405873
18
1.9
18
88
11
54
22
17
5
54
1.64
406456--406500
21
2.1
21
84
8
56
17
24
26
31
1.97
408705--408775
14
5.4
14
80
13
78
53
25
12
8
1.66
408696--408768
28
2.9
24
79
15
83
57
23
9
9
1.60
408715--408769
28
2.0
28
96
0
101
56
27
9
7
1.57
409726--409775
21
2.4
21
93
0
82
28
18
16
38
1.91
416393--416440
3
16.7
3
82
8
55
35
0
0
64
0.94
416394--416468
29
2.5
31
82
6
82
38
4
1
56
1.27
419136--419298
63
2.6
64
76
4
170
28
17
23
30
1.97
422575--422687
60
1.9
60
85
10
160
37
22
1
38
1.65
422866--422998
60
2.2
61
80
8
146
45
5
18
31
1.71
434943--434984
20
2.2
19
83
8
50
54
0
4
40
1.21
439995--440040
24
2.0
23
87
12
67
54
0
0
45
0.99
439995--440035
13
3.2
13
80
13
50
48
0
0
51
1.00

Tables:   1   2   3

The End!