Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008888.1 Hibiscus syriacus cultivar Beakdansim tig00112153_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1025554

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 488 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1009521--1009598
29
2.7
29
86
7
106
17
15
8
57
1.63
1013005--1013035
4
7.8
4
92
0
53
22
3
0
74
0.96
1013192--1013243
14
3.6
14
76
10
52
23
9
1
65
1.32
1015616--1015688
2
36.5
2
100
0
146
49
0
0
50
1.00
1016980--1017038
29
2.0
31
86
6
86
28
8
5
57
1.50
1017717--1017744
5
5.6
5
100
0
56
17
0
82
0
0.68
1017755--1017796
17
2.3
18
88
8
59
33
2
2
61
1.21
1023053--1023079
9
3.0
9
100
0
54
77
0
0
22
0.76

Tables:   1   2   3   4   5

The End!