Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008904.1 Hibiscus syriacus cultivar Beakdansim tig00112184_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  372056

Tables:   1   2   3   

This is table  3  of  3  ( 268 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
311664--311689
12
2.2
12
100
0
52
0
7
19
73
1.07
311691--311780
19
4.9
19
72
15
82
12
21
20
46
1.82
313649--313684
14
2.6
14
95
0
63
33
0
22
44
1.53
313791--313835
19
2.4
19
100
0
90
46
17
20
15
1.84
313862--314012
19
8.7
19
68
21
107
11
22
21
45
1.83
313885--313974
14
5.7
14
69
23
63
10
22
21
46
1.80
313866--313992
33
3.8
33
92
0
218
11
22
20
46
1.81
313965--314058
20
4.7
20
73
13
77
19
20
25
35
1.96
316522--316575
24
2.2
24
90
0
81
40
20
16
22
1.91
317309--317482
20
8.6
20
89
3
224
24
19
27
28
1.98
317334--317504
40
4.2
41
85
3
141
23
19
26
29
1.99
317472--317544
21
3.5
21
92
1
112
21
23
16
38
1.93
317471--317559
41
2.1
42
79
2
99
25
21
17
34
1.96
322212--322251
20
2.0
20
95
0
71
45
10
22
22
1.82
322406--322436
15
2.1
15
93
0
53
54
0
0
45
0.99
322466--322506
21
2.0
21
85
9
57
39
0
0
60
0.96
324471--324525
27
2.0
27
96
0
101
47
21
7
23
1.76
327428--327589
60
2.7
59
88
2
225
29
14
19
37
1.90
327996--328081
28
3.0
28
70
18
68
44
4
17
33
1.69
328742--328782
21
1.9
22
85
5
57
43
2
0
53
1.13
328790--328816
3
9.0
3
100
0
54
33
0
0
66
0.92
342502--342540
18
2.2
17
90
4
60
74
0
15
10
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
343394--343864
136
3.5
135
87
4
651
34
18
21
25
1.96
350082--350130
21
2.3
22
82
10
57
36
0
6
57
1.24
354618--354966
136
2.6
136
90
1
524
24
22
18
34
1.96
355937--355993
10
5.8
10
82
12
55
1
12
0
85
0.66
355930--355993
22
2.8
24
76
11
80
3
14
0
82
0.78
355937--355990
12
4.2
12
84
15
65
1
11
0
87
0.63

Tables:   1   2   3

The End!