Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008919.1 Hibiscus syriacus cultivar Beakdansim tig00112223_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1453011

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 485 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1443524--1443574
21
2.5
20
82
14
61
35
9
5
49
1.60
1445934--1445977
15
2.8
16
82
3
54
54
0
27
18
1.44
1447156--1447207
21
2.6
21
90
6
81
34
13
5
46
1.67
1449674--1449732
6
10.3
6
78
14
54
77
1
20
0
0.85
1449668--1449731
27
2.3
28
84
10
87
78
1
20
0
0.84

Tables:   1   2   3   4   5

The End!