Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008960.1 Hibiscus syriacus cultivar Beakdansim tig00112294_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  362692

Tables:   1   2   3   

This is table  3  of  3  ( 251 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
343642--343686
21
2.1
21
83
0
54
31
28
15
24
1.96
344606--344769
81
2.0
83
84
2
215
34
17
15
32
1.91
347389--347435
3
15.7
3
100
0
94
31
0
0
68
0.90
348451--348669
43
5.1
43
82
4
144
24
17
21
37
1.94
348490--348667
42
4.2
43
84
4
220
23
17
20
38
1.93
348644--348694
25
2.1
25
92
3
86
17
23
25
33
1.96
348601--348736
68
2.0
67
84
1
173
22
20
21
35
1.96
350328--350439
51
2.2
50
82
4
127
16
27
26
28
1.97
356225--356254
12
2.6
12
94
5
53
66
10
0
23
1.21
357436--357519
39
2.2
39
80
8
91
39
2
42
15
1.60
362579--362662
39
2.2
39
80
8
91
39
2
42
15
1.60

Tables:   1   2   3

The End!