Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009011.1 Hibiscus syriacus cultivar Beakdansim tig00112399_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  579188

Tables:   1   2   3   4   

This is table  4  of  4  ( 368 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
566875--566920
19
2.4
19
88
3
74
17
17
10
54
1.70
567041--567086
20
2.3
20
89
10
76
17
17
10
54
1.70
568412--568452
20
2.0
20
85
0
55
29
19
26
24
1.98
568495--568532
17
2.2
17
95
0
67
26
2
23
47
1.65
569452--569490
2
19.0
2
94
5
69
48
0
2
48
1.15
575231--575305
31
2.4
31
93
0
123
29
8
14
48
1.72
575461--575552
27
3.4
26
78
13
98
50
0
4
45
1.21
575479--575552
25
2.9
25
78
13
78
48
0
5
45
1.25

Tables:   1   2   3   4

The End!