Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000935.1 Hibiscus syriacus cultivar Beakdansim tig00001869_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  730910

Tables:   1   2   3   4   

This is table  4  of  4  ( 368 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
727447--727480
16
2.1
17
94
5
61
82
0
17
0
0.67
727439--727483
17
2.7
16
86
10
63
82
0
17
0
0.68
728613--729078
83
5.7
83
92
3
721
28
13
22
35
1.92
728613--729078
162
2.8
166
89
4
703
28
13
22
35
1.92
729792--730774
113
9.0
111
86
9
1260
35
15
18
30
1.92
730478--730534
17
3.2
17
67
13
51
50
7
22
19
1.71
729792--730774
221
4.5
219
86
7
1261
35
15
18
30
1.92
730702--730757
17
3.2
17
68
26
53
48
8
25
17
1.76

Tables:   1   2   3   4

The End!