Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009370.1 Hibiscus syriacus cultivar Beakdansim tig00113236_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  211821

Tables:   1   2   

This is table  2  of  2  ( 140 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
196905--197039
52
2.5
54
75
18
131
45
24
19
10
1.81
197035--197163
19
7.3
19
75
17
125
8
17
28
45
1.77
197035--197126
33
2.8
33
93
3
150
7
18
28
45
1.76
197207--197585
93
4.1
93
98
1
735
46
18
12
22
1.83
197207--197585
184
2.0
186
98
1
735
46
18
12
22
1.83
199289--199378
14
5.7
14
74
23
81
42
23
25
8
1.83
199281--199395
33
3.5
33
95
0
212
45
20
24
9
1.81
199288--199400
19
6.8
18
72
23
88
43
22
24
9
1.83
199412--199466
14
3.6
14
73
21
56
9
27
23
40
1.85
199587--199657
33
2.2
33
92
0
115
47
18
22
11
1.80
199839--199892
21
2.5
22
78
3
65
20
16
38
24
1.92
200038--200231
20
9.6
20
82
5
221
19
19
25
35
1.95
200038--200231
60
3.2
60
83
0
253
19
19
25
35
1.95
200224--200300
21
3.7
20
70
13
57
27
16
23
32
1.96
200286--200337
20
2.6
20
96
0
95
21
13
26
38
1.90
200616--200654
14
2.6
14
88
8
51
61
0
2
35
1.10
202753--202821
24
3.2
24
66
30
73
33
13
2
50
1.56
206549--206595
22
2.1
22
100
0
94
17
34
14
34
1.90
206853--206949
2
54.5
2
71
22
74
44
0
0
55
0.99
206875--206952
30
2.5
32
88
12
119
41
0
0
58
0.98

Tables:   1   2

The End!