Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009397.1 Hibiscus syriacus cultivar Beakdansim tig00113302_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  510949

Tables:   1   2   3   4   

This is table  4  of  4  ( 367 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
498435--498472
18
2.1
19
85
5
51
39
0
0
60
0.97
500877--500919
15
2.9
15
85
0
50
16
13
60
9
1.58
504372--504406
12
2.9
12
86
0
52
20
28
5
45
1.73
504712--504759
23
2.1
22
85
11
62
54
6
4
35
1.45
509953--510433
54
9.0
54
84
6
529
31
23
17
27
1.97
509956--510427
213
2.2
216
84
8
610
31
23
17
27
1.97
510438--510509
37
2.0
36
94
2
126
20
22
20
36
1.96

Tables:   1   2   3   4

The End!