Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009626.1 Hibiscus syriacus cultivar Beakdansim tig00117018_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  478969

Tables:   1   2   3   

This is table  3  of  3  ( 251 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
450900--450947
21
2.2
22
81
7
53
56
0
12
31
1.37
451840--451901
31
2.0
31
90
0
97
35
17
3
43
1.66
452286--452318
3
11.0
3
100
0
66
33
0
0
66
0.92
453187--453233
23
2.0
23
100
0
94
36
38
8
17
1.80
461649--461673
2
12.5
2
100
0
50
52
0
0
48
1.00
463622--463680
31
1.9
31
82
6
75
25
10
18
45
1.81
473551--473577
3
9.0
3
100
0
54
66
0
0
33
0.92
475638--475725
45
2.0
45
86
4
124
28
34
13
23
1.93
475833--475971
36
3.9
35
94
3
235
47
15
5
30
1.69
478134--478191
20
2.6
22
86
10
75
27
20
20
31
1.98
478179--478319
64
2.2
63
81
7
160
25
24
18
31
1.97

Tables:   1   2   3

The End!