Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010601.1 Kokia drynarioides strain JFW-HI SEQ_125532, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  333547

Tables:   1   2   

This is table  2  of  2  ( 143 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
232232--232406
29
6.0
28
74
15
131
32
4
27
35
1.77
232151--232399
87
2.8
87
79
6
227
33
4
25
36
1.75
235459--235488
16
1.9
15
93
6
51
70
0
0
30
0.88
237447--237491
23
2.0
23
82
8
56
44
22
4
28
1.72
240619--240683
20
3.2
20
76
8
69
40
23
4
32
1.75
242334--242398
30
2.2
30
83
2
78
30
26
3
40
1.71
244830--244868
18
2.1
18
85
9
51
38
20
20
20
1.94
245020--245070
25
2.0
25
88
0
75
19
1
31
47
1.61
245884--246034
50
3.0
51
72
5
126
25
31
17
25
1.97
278698--278728
9
3.4
9
95
0
53
51
0
3
45
1.17
288653--288701
15
3.4
14
83
8
53
2
4
18
75
1.06
288649--288689
17
2.4
17
87
0
64
4
0
14
80
0.87
294620--294783
84
1.9
85
88
3
251
42
22
6
28
1.78
294620--294837
84
2.5
84
84
4
249
39
21
7
30
1.82
294926--295014
40
2.2
38
78
13
90
55
1
3
40
1.24
295260--295355
29
3.3
29
77
10
81
30
7
5
57
1.48
307993--308085
46
2.0
46
100
0
186
15
25
17
41
1.88
310006--310110
29
3.6
29
92
0
165
52
13
7
26
1.67
314540--314624
32
2.8
30
83
13
102
55
20
10
14
1.68
314540--314640
31
3.3
32
81
10
88
56
17
11
13
1.67
325240--325372
70
1.9
67
85
7
178
45
10
9
33
1.71
330393--330444
25
2.1
25
89
3
79
46
11
1
40
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
332726--332789
35
1.9
31
81
12
74
56
1
0
42
1.09

Tables:   1   2

The End!