Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012455.1 Kokia drynarioides strain JFW-HI SEQ_127459, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  421919

Tables:   1   2   

This is table  2  of  2  ( 164 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
358519--358545
7
3.9
7
100
0
54
59
0
29
11
1.32
360975--361009
14
2.5
14
90
0
52
31
5
2
60
1.35
361148--361211
20
2.7
25
72
25
75
40
10
0
48
1.38
361154--361200
20
2.3
20
96
0
85
44
10
0
44
1.38
361396--361474
41
1.9
41
82
10
99
18
31
22
26
1.97
364472--364599
61
2.2
59
81
8
145
40
16
21
21
1.91
367647--367761
24
4.7
24
75
8
81
24
33
10
32
1.89
367669--367787
50
2.4
50
84
0
148
22
31
12
33
1.91
367822--367880
24
2.5
24
91
0
91
18
27
18
35
1.94
374728--374808
26
3.2
26
68
16
71
23
27
16
33
1.95
374703--374867
50
3.3
50
81
3
154
23
27
15
33
1.95
385895--385919
10
2.5
10
100
0
50
44
8
32
16
1.76
387864--387892
14
2.1
14
100
0
58
37
27
6
27
1.82
392606--392838
43
5.4
43
83
6
274
38
9
21
31
1.85
392606--392860
87
2.9
86
84
4
316
37
9
21
31
1.86
392606--392856
130
1.9
130
92
0
421
37
9
21
31
1.86
394623--394720
50
2.0
50
89
0
151
38
19
11
30
1.87
395220--395263
20
2.2
20
84
8
54
65
0
6
27
1.17
396055--396190
9
13.8
10
70
19
65
33
2
0
62
1.15
396052--396171
19
6.1
18
70
19
55
35
3
0
61
1.12
396045--396212
10
16.8
10
74
11
123
32
3
0
63
1.16
396043--396165
39
3.1
39
76
13
108
35
4
0
60
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
396116--396166
22
2.4
22
83
3
59
37
0
0
62
0.95
396053--396187
19
7.5
17
66
20
53
33
2
0
62
1.15
396636--396698
25
2.6
24
75
5
63
33
3
4
58
1.35
397433--397498
30
2.2
30
83
8
80
48
4
1
45
1.32
398435--398550
12
10.2
12
72
11
66
67
17
6
9
1.39
398421--398512
43
2.1
44
86
6
125
67
19
4
8
1.35
398487--398625
21
6.7
21
68
18
58
69
17
5
7
1.31
398552--398626
19
3.8
19
76
15
80
70
20
5
4
1.23
398526--398584
28
2.1
29
83
3
75
69
13
6
10
1.35
398521--398585
29
2.2
30
75
10
71
70
12
6
10
1.32
398573--398644
22
3.1
22
76
8
72
75
19
2
2
1.06
398552--398641
41
2.2
40
77
18
96
72
20
4
3
1.17
409233--409263
7
4.4
7
91
0
53
70
0
3
25
1.02
410715--410768
24
2.2
24
83
0
63
18
12
1
66
1.33
410844--410939
40
2.4
40
96
0
174
43
17
16
21
1.87
411000--411131
41
3.2
41
80
6
133
25
22
21
31
1.98
411062--411148
41
2.1
41
86
0
120
32
20
24
22
1.98
412444--412479
16
2.2
16
100
0
72
27
11
5
55
1.57
419785--420013
43
5.3
44
77
3
189
26
19
26
27
1.99
419785--420013
86
2.7
87
77
3
212
26
19
26
27
1.99
420168--420206
8
4.8
8
81
6
51
12
0
15
71
1.14
421890--421919
2
15.0
2
100
0
60
0
50
0
50
1.00

Tables:   1   2

The End!