Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013010.1 Kokia drynarioides strain JFW-HI SEQ_128028, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  507880

Tables:   1   2   3   

This is table  3  of  3  ( 264 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
422495--422519
2
12.5
2
100
0
50
48
0
0
52
1.00
422908--422937
8
3.8
8
95
0
51
70
0
0
30
0.88
422934--422994
18
3.2
19
78
21
65
34
3
1
60
1.23
435036--435070
17
2.1
17
100
0
70
65
5
22
5
1.36
440949--441011
31
2.0
31
96
0
117
44
12
19
23
1.85
442998--443049
17
2.7
19
80
20
63
30
5
1
61
1.30
442998--443060
22
3.1
20
76
21
60
31
4
3
60
1.33
446320--446367
21
2.3
21
88
0
69
52
14
4
29
1.60
451710--451740
3
10.3
3
100
0
62
64
0
0
35
0.94
453539--453571
15
2.1
16
88
5
50
63
12
12
12
1.52
454903--454936
16
2.2
16
89
5
52
50
14
8
26
1.72
457332--457567
101
2.3
103
88
5
363
34
24
13
26
1.93
457332--457566
51
4.6
52
90
2
361
34
24
14
26
1.93
460882--460969
43
2.0
43
89
4
133
36
20
22
20
1.95
468315--468377
28
2.3
28
94
2
110
28
22
0
49
1.50
471700--471734
12
2.9
12
100
0
70
0
17
5
77
0.96
473561--473806
122
2.0
122
86
3
343
22
22
27
28
1.99
477295--477496
92
2.2
91
83
3
244
33
25
15
25
1.95
488318--488354
18
2.1
18
94
0
65
21
10
13
54
1.69
488325--488363
18
2.2
18
90
4
62
17
12
12
56
1.67
488958--488991
10
3.3
10
87
4
50
79
0
20
0
0.73
496081--496179
38
2.6
38
82
4
121
30
32
13
24
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
504654--504707
18
2.9
18
77
2
63
29
25
20
24
1.99
506879--506990
38
2.8
39
71
12
104
33
27
19
18
1.96

Tables:   1   2   3

The End!