Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015082.1 Kokia drynarioides strain JFW-HI SEQ_130126, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  435845

Tables:   1   2   

This is table  2  of  2  ( 139 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
413628--413747
48
2.5
48
91
4
190
34
13
26
25
1.93
415530--415952
30
14.2
30
81
7
391
35
24
2
37
1.68
430634--431870
28
45.1
28
76
8
700
37
11
5
44
1.65
430634--432088
56
26.7
56
77
8
1104
37
11
5
45
1.64
430759--430799
20
2.0
20
100
0
82
41
0
4
53
1.22
430863--430903
21
2.0
21
90
0
64
34
4
4
56
1.42
430882--432088
83
14.6
83
78
7
974
37
11
6
44
1.65
430926--432082
28
42.1
27
77
8
801
37
11
6
45
1.66
432157--432200
20
2.3
19
84
4
52
27
0
25
47
1.52
432251--432355
31
3.4
31
84
4
131
21
0
32
45
1.52
432248--432328
25
3.2
25
71
5
74
20
0
34
44
1.52
432257--432326
12
5.7
12
74
5
50
18
0
35
45
1.50
432203--432381
32
5.5
32
78
6
130
23
0
30
45
1.57
432747--432796
16
3.4
16
68
21
54
34
14
0
52
1.42
433159--433225
16
4.4
16
68
21
63
37
10
1
50
1.46
432404--433200
28
28.9
28
78
5
586
34
11
4
49
1.60
433158--433245
44
2.0
44
100
0
176
38
11
2
47
1.52
433202--433375
28
6.2
28
81
6
201
32
13
5
48
1.64
433202--433397
83
2.3
84
81
7
236
34
13
5
46
1.65

Tables:   1   2

The End!